Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 RNU1-129P-201ENST00000384064 167 ntBASIC17.53■□□□□ 0.4
TRIM11Q96F44 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PMS2P4-201ENST00000412466 1052 ntBASIC17.53■□□□□ 0.4
TRIM11Q96F44 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 AC098831.1-202ENST00000438821 336 ntBASIC17.53■□□□□ 0.4
TRIM11Q96F44 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 U1.21-201ENST00000580816 167 ntBASIC17.53■□□□□ 0.4
TRIM11Q96F44 AC104692.2-201ENST00000603054 253 ntBASIC17.53■□□□□ 0.4
TRIM11Q96F44 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 VN2R19P-201ENST00000442399 1052 ntBASIC17.52■□□□□ 0.4
TRIM11Q96F44 AL513480.1-201ENST00000451731 511 ntBASIC17.52■□□□□ 0.4
TRIM11Q96F44 AL662844.1-201ENST00000546340 181 ntBASIC17.52■□□□□ 0.4
TRIM11Q96F44 AL031055.1-201ENST00000606362 631 ntBASIC17.52■□□□□ 0.4
TRIM11Q96F44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM11Q96F44 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM11Q96F44 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM11Q96F44 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM11Q96F44 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.51■□□□□ 0.39
TRIM11Q96F44 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms