Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CHMP4CQ96CF2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 SNHG9-202ENST00000564014 471 ntBASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 AP002472.1-201ENST00000577490 586 ntBASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 ELL2P1-201ENST00000413990 1906 ntBASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP4CQ96CF2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 SLC22A20-204ENST00000530038 1673 ntBASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP4CQ96CF2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 HMGA1P7-201ENST00000406908 502 ntBASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP4CQ96CF2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms