Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MTDHP4-201ENST00000600287 670 ntBASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 FOSL1P1-201ENST00000511041 816 ntBASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 AC020765.3-201ENST00000613051 740 ntBASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC44A1Q8WWI5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AC006504.4-201ENST00000592118 1568 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 MIR648-201ENST00000385046 94 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 ELK2BP-201ENST00000415014 1224 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 FGFR3P6-201ENST00000457012 610 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms