Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 MIR5189-201ENST00000577370 114 ntBASIC19.86■□□□□ 0.77
SNED1Q8TER0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 AL158212.4-201ENST00000624062 1286 ntBASIC19.86■□□□□ 0.77
SNED1Q8TER0 AL033527.5-201ENST00000641382 801 ntBASIC19.86■□□□□ 0.77
SNED1Q8TER0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNED1Q8TER0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
SNED1Q8TER0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL139010.1-201ENST00000454878 894 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL583810.1-201ENST00000553344 1045 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC084346.2-201ENST00000607097 949 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC018665.1-201ENST00000622927 1362 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL136982.4-201ENST00000437689 1740 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 Z97205.2-201ENST00000564697 1639 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 CYP4F24P-201ENST00000586049 1580 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL133338.1-201ENST00000565695 1517 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 CLK3P2-201ENST00000427566 1453 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC093525.8-201ENST00000624099 1342 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 EEF1DP4-201ENST00000446006 880 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 AC020765.3-201ENST00000613051 740 ntBASIC19.85■□□□□ 0.77
SNED1Q8TER0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.85■□□□□ 0.77
SNED1Q8TER0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNED1Q8TER0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.84■□□□□ 0.77
SNED1Q8TER0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SNED1Q8TER0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNED1Q8TER0 PDIA3P1-201ENST00000471856 1510 ntBASIC19.84■□□□□ 0.77
SNED1Q8TER0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms