Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 WASH6P-202ENST00000359512 1437 ntBASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 PCGF3-213ENST00000620529 1899 ntBASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC148Q8NFR7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 ACTG1P14-201ENST00000446382 1122 ntBASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 KRT18P34-201ENST00000488218 1270 ntBASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 RARRES2P8-201ENST00000566335 367 ntBASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC148Q8NFR7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 ALG1L5P-201ENST00000482043 771 ntBASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AC092902.6-201ENST00000641783 218 ntBASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 AC016027.1-202ENST00000607927 1699 ntBASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 PCDHA14-201ENST00000506751 2298 ntBASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC148Q8NFR7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 AL355306.1-201ENST00000415580 579 ntBASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 HTR5BP-201ENST00000430851 1154 ntBASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms