Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNE1Q8NF91 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AL138781.2-201ENST00000617896 1843 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PTMS-202ENST00000389462 773 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AL355306.1-201ENST00000415580 579 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 GGTLC5P-201ENST00000617623 998 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 CENPM-205ENST00000404067 905 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 DDX43P3-201ENST00000441064 443 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PMS2P4-201ENST00000412466 1052 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 KRT18P32-201ENST00000424695 1287 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC236430.1-201ENST00000402231 743 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC112191.1-201ENST00000523689 701 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNE1Q8NF91 C20orf181-201ENST00000623918 480 ntBASIC5.15□□□□□ -1.59
SYNE1Q8NF91 AC084121.4-201ENST00000641598 221 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms