Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 AP002469.2-201ENST00000531724 424 ntBASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 AC012569.1-201ENST00000591191 1524 ntBASIC15.21■□□□□ 0.03
LSMEM1Q8N8F7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LSMEM1Q8N8F7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 AL031284.1-201ENST00000419297 478 ntBASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 POU5F1P6-201ENST00000466990 990 ntBASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 MIR4515-201ENST00000584082 81 ntBASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ACTL9-202ENST00000612068 1252 ntBASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 PCGF3-213ENST00000620529 1899 ntBASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LSMEM1Q8N8F7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms