Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 IGHV3-42-201ENST00000520410 361 ntBASIC25.58■■□□□ 1.69
VPS8Q8N3P4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
VPS8Q8N3P4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
VPS8Q8N3P4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
VPS8Q8N3P4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 LTB4R2-202ENST00000528054 3092 ntBASIC25.57■■□□□ 1.68
VPS8Q8N3P4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 AL512361.1-201ENST00000554200 418 ntBASIC25.57■■□□□ 1.68
VPS8Q8N3P4 AC010336.2-201ENST00000564226 506 ntBASIC25.57■■□□□ 1.68
VPS8Q8N3P4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
VPS8Q8N3P4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 AC241585.1-201ENST00000433527 519 ntBASIC25.56■■□□□ 1.68
VPS8Q8N3P4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 AL590560.3-201ENST00000623350 461 ntBASIC25.56■■□□□ 1.68
VPS8Q8N3P4 IMPDH1P4-201ENST00000445028 1534 ntBASIC25.56■■□□□ 1.68
VPS8Q8N3P4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS8Q8N3P4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 ZNF890P-202ENST00000530367 1156 ntBASIC25.55■■□□□ 1.68
VPS8Q8N3P4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 AC006449.6-201ENST00000612330 2296 ntBASIC25.55■■□□□ 1.68
VPS8Q8N3P4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 KRT8P12-202ENST00000472924 1397 ntBASIC25.55■■□□□ 1.68
VPS8Q8N3P4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VPS8Q8N3P4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
VPS8Q8N3P4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
VPS8Q8N3P4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms