Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.14■□□□□ 0.33
SCML4Q8N228 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 AC109322.1-201ENST00000524499 1264 ntBASIC17.14■□□□□ 0.33
SCML4Q8N228 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.14■□□□□ 0.33
SCML4Q8N228 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 AC026150.2-201ENST00000564693 1156 ntBASIC17.14■□□□□ 0.33
SCML4Q8N228 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.14■□□□□ 0.33
SCML4Q8N228 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.14■□□□□ 0.33
SCML4Q8N228 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SCML4Q8N228 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.14■□□□□ 0.33
SCML4Q8N228 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCML4Q8N228 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SCML4Q8N228 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
SCML4Q8N228 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SCML4Q8N228 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.13■□□□□ 0.33
SCML4Q8N228 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.13■□□□□ 0.33
SCML4Q8N228 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 AC069262.1-201ENST00000539058 672 ntBASIC17.13■□□□□ 0.33
SCML4Q8N228 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 AC061975.2-201ENST00000581722 295 ntBASIC17.13■□□□□ 0.33
SCML4Q8N228 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SCML4Q8N228 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SCML4Q8N228 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
SCML4Q8N228 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SCML4Q8N228 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.13■□□□□ 0.33
SCML4Q8N228 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCML4Q8N228 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.12■□□□□ 0.33
SCML4Q8N228 SPDYE7P-202ENST00000420373 878 ntBASIC17.12■□□□□ 0.33
SCML4Q8N228 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.12■□□□□ 0.33
SCML4Q8N228 AC245100.5-201ENST00000452108 331 ntBASIC17.12■□□□□ 0.33
SCML4Q8N228 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 AC025678.2-201ENST00000562061 970 ntBASIC17.12■□□□□ 0.33
SCML4Q8N228 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms