Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC6Q8IVU3 AC093525.9-201ENST00000624961 1746 ntBASIC17.84■□□□□ 0.45
HERC6Q8IVU3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
HERC6Q8IVU3 SLC7A15P-201ENST00000424028 1363 ntBASIC17.83■□□□□ 0.45
HERC6Q8IVU3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 AL512361.1-201ENST00000554200 418 ntBASIC17.83■□□□□ 0.44
HERC6Q8IVU3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 AL606495.2-201ENST00000605867 535 ntBASIC17.83■□□□□ 0.44
HERC6Q8IVU3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC6Q8IVU3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 TTTY23B-201ENST00000442790 549 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 RN7SL837P-201ENST00000463010 287 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 AC092658.1-201ENST00000505836 891 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 SPDYE18-201ENST00000510091 1050 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 AC044860.1-202ENST00000559481 777 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms