Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 IGHV3-65-201ENST00000523210 341 ntBASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00346Q8IVM7 AC132872.4-202ENST00000622924 2756 ntBASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
LINC00346Q8IVM7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC129492.6-201ENST00000611383 1305 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC004870.1-201ENST00000315132 882 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC108073.2-201ENST00000464002 357 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC092910.1-201ENST00000482027 1129 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC087641.1-201ENST00000557561 1021 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AL031008.1-201ENST00000619963 541 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC004790.2-201ENST00000623588 572 ntBASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00346Q8IVM7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 RPS2P28-201ENST00000314255 741 ntBASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00346Q8IVM7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms