Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AL512384.1-201ENST00000406683 331 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AC098850.1-201ENST00000419919 790 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 HIST3H2BA-201ENST00000436555 524 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CTBP2P3-201ENST00000585629 1255 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 MIR6752-201ENST00000618442 71 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 MIR6069-201ENST00000620069 79 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 AC007431.3-201ENST00000623221 587 ntBASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4RL1Q86UN2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 AL136982.4-201ENST00000437689 1740 ntBASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 PCGF3-213ENST00000620529 1899 ntBASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 IGHV3-71-201ENST00000523324 359 ntBASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 TPRX2P-201ENST00000535362 881 ntBASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 U82695.1-201ENST00000635752 1889 ntBASIC17.61■□□□□ 0.41
RTN4RL1Q86UN2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 AC106820.2-201ENST00000563775 3264 ntBASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4RL1Q86UN2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms