Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 AC004832.2-201ENST00000426397 482 ntBASIC11.06□□□□□ -0.64
SCXQ7RTU7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 STK19B-204ENST00000512515 211 ntBASIC11.06□□□□□ -0.64
SCXQ7RTU7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 AL136379.1-201ENST00000623471 2642 ntBASIC11.06□□□□□ -0.64
SCXQ7RTU7 AC105020.1-201ENST00000435356 2205 ntBASIC11.06□□□□□ -0.64
SCXQ7RTU7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCXQ7RTU7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SCXQ7RTU7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 RPS8P6-201ENST00000426177 609 ntBASIC11.05□□□□□ -0.64
SCXQ7RTU7 AC004967.1-201ENST00000453589 447 ntBASIC11.05□□□□□ -0.64
SCXQ7RTU7 AC108073.2-201ENST00000464002 357 ntBASIC11.05□□□□□ -0.64
SCXQ7RTU7 RPS15P9-201ENST00000494093 319 ntBASIC11.05□□□□□ -0.64
SCXQ7RTU7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 STK25P1-201ENST00000585406 838 ntBASIC11.05□□□□□ -0.64
SCXQ7RTU7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms