Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 AL121894.2-201ENST00000602977 491 ntBASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL4BQ6ZWI9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC079781.5-202ENST00000641784 3743 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC093525.9-201ENST00000624961 1746 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 PRAL-201ENST00000624952 3286 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 PRYP5-201ENST00000451909 266 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC073648.2-201ENST00000510116 352 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL4BQ6ZWI9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 LINC00982-205ENST00000420957 435 ntBASIC14.92□□□□□ -0.02
RFPL4BQ6ZWI9 ACTG1P4-201ENST00000425123 1122 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms