Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AC139749.1-202ENST00000617529 3139 ntBASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXR1Q6PIV2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.33■□□□□ 0.37
FOXR1Q6PIV2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 PMS2P7-201ENST00000506558 1336 ntBASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 AC106730.1-201ENST00000566722 1090 ntBASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 AC139887.3-201ENST00000568585 713 ntBASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 AC093525.9-201ENST00000624961 1746 ntBASIC17.33■□□□□ 0.36
FOXR1Q6PIV2 PPT1-215ENST00000641471 2368 ntBASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms