Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AL031055.1-201ENST00000606362 631 ntBASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AC079328.2-201ENST00000561241 3354 ntBASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AL645728.1-201ENST00000366221 2101 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AC254562.1-201ENST00000417586 456 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 CNN2P11-201ENST00000429351 262 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AC006277.1-201ENST00000624348 1610 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 AC026691.1-201ENST00000602502 2017 ntBASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RFWD3Q6PCD5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TIMM8BP1-201ENST00000452384 211 ntBASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 KRT8P48-201ENST00000515599 1220 ntBASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 AC105339.1-204ENST00000636249 355 ntBASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFWD3Q6PCD5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms