Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 AC010507.1-201ENST00000633895 436 ntBASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 AL513523.2-202ENST00000427283 2040 ntBASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF549Q6P9A3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF549Q6P9A3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF549Q6P9A3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 RNU1-129P-201ENST00000384064 167 ntBASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 AL513480.1-201ENST00000451731 511 ntBASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 U1.21-201ENST00000580816 167 ntBASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 Z83851.2-201ENST00000609564 659 ntBASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF549Q6P9A3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 RHOQP3-201ENST00000437982 621 ntBASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 FDX1P1-201ENST00000449115 551 ntBASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 AC034105.1-201ENST00000563488 319 ntBASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF549Q6P9A3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 LINC01144-201ENST00000626198 1710 ntBASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 AC079776.4-201ENST00000511039 504 ntBASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 AC096734.2-201ENST00000562054 433 ntBASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms