Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AC004890.2-204ENST00000481968 304 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 OR13I1P-201ENST00000609811 1264 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 AL008721.1-201ENST00000609964 604 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AL590560.3-201ENST00000623350 461 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AL035456.1-201ENST00000456064 1369 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AC006538.1-201ENST00000567905 1585 ntBASIC17.48■□□□□ 0.39
VARS2Q5ST30 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 TSSK5P-201ENST00000423978 907 ntBASIC17.47■□□□□ 0.39
VARS2Q5ST30 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 HLA-V-204ENST00000476601 1289 ntBASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 AC105020.1-201ENST00000435356 2205 ntBASIC17.47■□□□□ 0.39
VARS2Q5ST30 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARS2Q5ST30 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
VARS2Q5ST30 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 HLA-V-201ENST00000429037 534 ntBASIC17.46■□□□□ 0.39
VARS2Q5ST30 MTND6P24-201ENST00000440466 518 ntBASIC17.46■□□□□ 0.39
VARS2Q5ST30 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 BANF1P1-201ENST00000553684 263 ntBASIC17.46■□□□□ 0.39
VARS2Q5ST30 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 AL034417.3-201ENST00000641100 1043 ntBASIC17.46■□□□□ 0.39
VARS2Q5ST30 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.46■□□□□ 0.39
VARS2Q5ST30 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VARS2Q5ST30 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms