Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AC136632.2-201ENST00000512891 861 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 MIR1199-201ENST00000621445 119 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 ME2P1-201ENST00000426028 1970 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AC131009.4-201ENST00000624048 1740 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AL512652.2-201ENST00000625156 1716 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 AP002414.3-201ENST00000589352 1468 ntBASIC16.16■□□□□ 0.18
SGO1Q5FBB7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SGO1Q5FBB7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SLC22A20-204ENST00000530038 1673 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AC073621.1-201ENST00000392730 636 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 KRT18P27-201ENST00000427733 1299 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 MIR4492-201ENST00000581627 80 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AL139011.1-202ENST00000642063 584 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 AC126755.1-201ENST00000525846 6405 ntBASIC16.15■□□□□ 0.18
SGO1Q5FBB7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SGO1Q5FBB7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SGO1Q5FBB7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SGO1Q5FBB7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SGO1Q5FBB7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SGO1Q5FBB7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
SGO1Q5FBB7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC132872.4-202ENST00000622924 2756 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms