Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 MIR943-201ENST00000401286 94 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 TREML5P-201ENST00000421694 576 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 AC092580.3-201ENST00000430932 139 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 UGT1A2P-201ENST00000454886 866 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 MIR4745-201ENST00000577608 62 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFX7Q2KHR2 AC073439.1-201ENST00000624121 1774 ntBASIC19.9■□□□□ 0.78
RFX7Q2KHR2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX7Q2KHR2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RFX7Q2KHR2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX7Q2KHR2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFX7Q2KHR2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.89■□□□□ 0.78
RFX7Q2KHR2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 SPDYE7P-202ENST00000420373 878 ntBASIC19.89■□□□□ 0.77
RFX7Q2KHR2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 PRYP6-201ENST00000514804 343 ntBASIC19.89■□□□□ 0.77
RFX7Q2KHR2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RFX7Q2KHR2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 AC006449.5-201ENST00000610658 2098 ntBASIC19.88■□□□□ 0.77
RFX7Q2KHR2 AC099398.1-201ENST00000567919 2776 ntBASIC19.88■□□□□ 0.77
RFX7Q2KHR2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms