Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IRX3P78415 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 HLA-H-201ENST00000383620 1096 ntBASIC19.26■□□□□ 0.67
IRX3P78415 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
IRX3P78415 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
IRX3P78415 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX3P78415 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.26■□□□□ 0.67
IRX3P78415 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.26■□□□□ 0.67
IRX3P78415 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.26■□□□□ 0.67
IRX3P78415 AL662799.1-202ENST00000614205 422 ntBASIC19.26■□□□□ 0.67
IRX3P78415 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
IRX3P78415 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 AC116353.5-201ENST00000638148 1699 ntBASIC19.26■□□□□ 0.67
IRX3P78415 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX3P78415 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
IRX3P78415 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX3P78415 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
IRX3P78415 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IRX3P78415 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
IRX3P78415 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.25■□□□□ 0.67
IRX3P78415 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.25■□□□□ 0.67
IRX3P78415 HLA-V-204ENST00000476601 1289 ntBASIC19.25■□□□□ 0.67
IRX3P78415 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.25■□□□□ 0.67
IRX3P78415 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
IRX3P78415 AC025048.6-201ENST00000634326 1161 ntBASIC19.25■□□□□ 0.67
IRX3P78415 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 AL662844.4-201ENST00000606367 2838 ntBASIC19.25■□□□□ 0.67
IRX3P78415 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IRX3P78415 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IRX3P78415 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX3P78415 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX3P78415 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.24■□□□□ 0.67
IRX3P78415 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IRX3P78415 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 AL353705.2-201ENST00000428243 662 ntBASIC19.24■□□□□ 0.67
IRX3P78415 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX3P78415 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
IRX3P78415 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.24■□□□□ 0.67
IRX3P78415 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX3P78415 SPDYE22P-201ENST00000582158 798 ntBASIC19.24■□□□□ 0.67
IRX3P78415 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IRX3P78415 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.24■□□□□ 0.67
IRX3P78415 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX3P78415 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms