Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 BEND3P3-201ENST00000611030 2440 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 TP73-201ENST00000346387 4854 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TMEM258P61165 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 FGD5P1-202ENST00000614866 2498 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 AC133637.1-201ENST00000624115 1537 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC9.74□□□□□ -0.85
TMEM258P61165 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 METRNL-202ENST00000570778 967 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TMEM258P61165 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC9.74□□□□□ -0.85
TMEM258P61165 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 MXRA5Y-201ENST00000420610 8000 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 AL805961.2-201ENST00000642139 4817 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 CSPG4P12-201ENST00000558282 4853 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 PCDHA5-203ENST00000614258 4248 ntBASIC9.74□□□□□ -0.85
TMEM258P61165 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC9.74□□□□□ -0.85
TMEM258P61165 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TMEM258P61165 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
TMEM258P61165 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC9.73□□□□□ -0.85
TMEM258P61165 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC9.73□□□□□ -0.85
TMEM258P61165 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC9.73□□□□□ -0.85
TMEM258P61165 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC9.73□□□□□ -0.85
TMEM258P61165 AC087393.1-201ENST00000582896 145 ntBASIC9.73□□□□□ -0.85
TMEM258P61165 AL451085.2-201ENST00000605085 799 ntBASIC9.73□□□□□ -0.85
TMEM258P61165 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 SP100-208ENST00000427101 1922 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC9.73□□□□□ -0.85
TMEM258P61165 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TMEM258P61165 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC9.73□□□□□ -0.85
TMEM258P61165 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms