Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CDC42P60953 AC148477.5-201ENST00000625164 1645 ntBASIC15.21■□□□□ 0.03
CDC42P60953 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDC42P60953 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 TERF1P1-201ENST00000311003 1181 ntBASIC15.21■□□□□ 0.03
CDC42P60953 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC42P60953 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC42P60953 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC42P60953 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.21■□□□□ 0.03
CDC42P60953 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 AC092850.2-201ENST00000623821 2697 ntBASIC15.21■□□□□ 0.03
CDC42P60953 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDC42P60953 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42P60953 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42P60953 AC243591.1-201ENST00000452967 1364 ntBASIC15.21■□□□□ 0.02
CDC42P60953 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42P60953 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CDC42P60953 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDC42P60953 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42P60953 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.2■□□□□ 0.02
CDC42P60953 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC42P60953 POU5F1P6-201ENST00000466990 990 ntBASIC15.2■□□□□ 0.02
CDC42P60953 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
CDC42P60953 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 AC083849.1-201ENST00000615227 514 ntBASIC15.2■□□□□ 0.02
CDC42P60953 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CDC42P60953 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC42P60953 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42P60953 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC42P60953 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC42P60953 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms