Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.31□□□□□ -0.12
ACTBP60709 AC006058.4-201ENST00000624016 1670 ntBASIC14.31□□□□□ -0.12
ACTBP60709 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ACTBP60709 AC013467.2-201ENST00000605472 835 ntBASIC14.31□□□□□ -0.12
ACTBP60709 AL592071.1-201ENST00000611956 408 ntBASIC14.31□□□□□ -0.12
ACTBP60709 AC116407.4-201ENST00000623319 1061 ntBASIC14.31□□□□□ -0.12
ACTBP60709 AC124864.1-201ENST00000623408 392 ntBASIC14.31□□□□□ -0.12
ACTBP60709 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AP005117.1-202ENST00000581724 1908 ntBASIC14.31□□□□□ -0.12
ACTBP60709 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 AL365209.1-201ENST00000624418 6473 ntBASIC14.31□□□□□ -0.12
ACTBP60709 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTBP60709 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTBP60709 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTBP60709 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.3□□□□□ -0.12
ACTBP60709 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 AL161772.1-201ENST00000610494 4412 ntBASIC14.3□□□□□ -0.12
ACTBP60709 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.3□□□□□ -0.12
ACTBP60709 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 DUX4L17-201ENST00000557360 1267 ntBASIC14.3□□□□□ -0.12
ACTBP60709 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 AL445228.2-201ENST00000605589 952 ntBASIC14.3□□□□□ -0.12
ACTBP60709 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ACTBP60709 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ACTBP60709 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.3□□□□□ -0.12
ACTBP60709 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ACTBP60709 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms