Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 FAM197Y3-203ENST00000618346 717 ntBASIC16.14■□□□□ 0.17
AP1S2P56377 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
AP1S2P56377 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.14■□□□□ 0.17
AP1S2P56377 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.14■□□□□ 0.17
AP1S2P56377 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
AP1S2P56377 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S2P56377 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S2P56377 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 SLC25A1P1-201ENST00000528351 927 ntBASIC16.13■□□□□ 0.17
AP1S2P56377 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
AP1S2P56377 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S2P56377 AC018845.2-201ENST00000568326 409 ntBASIC16.13■□□□□ 0.17
AP1S2P56377 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S2P56377 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.13■□□□□ 0.17
AP1S2P56377 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 AC005052.1-201ENST00000625181 2492 ntBASIC16.13■□□□□ 0.17
AP1S2P56377 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S2P56377 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP1S2P56377 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S2P56377 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S2P56377 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
AP1S2P56377 MED15P5-201ENST00000423150 992 ntBASIC16.12■□□□□ 0.17
AP1S2P56377 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.12■□□□□ 0.17
AP1S2P56377 KRT18P2-201ENST00000447938 1258 ntBASIC16.12■□□□□ 0.17
AP1S2P56377 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.12■□□□□ 0.17
AP1S2P56377 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 PDPK2P-202ENST00000562415 1191 ntBASIC16.12■□□□□ 0.17
AP1S2P56377 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S2P56377 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S2P56377 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S2P56377 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S2P56377 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S2P56377 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP1S2P56377 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
AP1S2P56377 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S2P56377 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S2P56377 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
AP1S2P56377 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP1S2P56377 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S2P56377 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S2P56377 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S2P56377 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S2P56377 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP1S2P56377 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms