Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH11P55287 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
CDH11P55287 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH11P55287 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH11P55287 LINC00895-201ENST00000629028 1637 ntBASIC15.25■□□□□ 0.03
CDH11P55287 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
CDH11P55287 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH11P55287 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 RPS2P1-201ENST00000434010 821 ntBASIC15.24■□□□□ 0.03
CDH11P55287 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH11P55287 SLC25A1P1-201ENST00000528351 927 ntBASIC15.24■□□□□ 0.03
CDH11P55287 OR7E14P-202ENST00000530490 1290 ntBASIC15.24■□□□□ 0.03
CDH11P55287 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH11P55287 AF228730.7-201ENST00000641842 219 ntBASIC15.24■□□□□ 0.03
CDH11P55287 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH11P55287 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH11P55287 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH11P55287 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
CDH11P55287 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH11P55287 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH11P55287 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 AC005052.1-201ENST00000625181 2492 ntBASIC15.23■□□□□ 0.03
CDH11P55287 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 PMS2P1-201ENST00000431037 1228 ntBASIC15.23■□□□□ 0.03
CDH11P55287 HNRNPDP1-201ENST00000439535 754 ntBASIC15.23■□□□□ 0.03
CDH11P55287 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH11P55287 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH11P55287 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH11P55287 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH11P55287 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH11P55287 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH11P55287 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms