Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP11P51784 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
USP11P51784 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP11P51784 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.67■□□□□ 0.58
USP11P51784 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.67■□□□□ 0.58
USP11P51784 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.66■□□□□ 0.58
USP11P51784 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 PCDHA14-201ENST00000506751 2298 ntBASIC18.66■□□□□ 0.58
USP11P51784 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.66■□□□□ 0.58
USP11P51784 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP11P51784 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP11P51784 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.66■□□□□ 0.58
USP11P51784 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 HLA-J-203ENST00000494367 1087 ntBASIC18.66■□□□□ 0.58
USP11P51784 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 SLC25A39P2-201ENST00000537614 270 ntBASIC18.66■□□□□ 0.58
USP11P51784 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.66■□□□□ 0.58
USP11P51784 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP11P51784 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP11P51784 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP11P51784 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 KRT18P32-201ENST00000424695 1287 ntBASIC18.65■□□□□ 0.58
USP11P51784 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.65■□□□□ 0.58
USP11P51784 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP11P51784 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
USP11P51784 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 AL589702.1-201ENST00000641229 1509 ntBASIC18.64■□□□□ 0.58
USP11P51784 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
USP11P51784 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
USP11P51784 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP11P51784 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
USP11P51784 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 GPS2P2-201ENST00000430745 888 ntBASIC18.64■□□□□ 0.57
USP11P51784 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
USP11P51784 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.64■□□□□ 0.57
USP11P51784 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.64■□□□□ 0.57
USP11P51784 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms