Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 LINC01144-201ENST00000626198 1710 ntBASIC16.8■□□□□ 0.28
GRIA1P42261 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 PRSS29P-201ENST00000440800 595 ntBASIC16.8■□□□□ 0.28
GRIA1P42261 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
GRIA1P42261 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIA1P42261 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIA1P42261 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.8■□□□□ 0.28
GRIA1P42261 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GRIA1P42261 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 MIR4515-201ENST00000584082 81 ntBASIC16.8■□□□□ 0.28
GRIA1P42261 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIA1P42261 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIA1P42261 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIA1P42261 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GRIA1P42261 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 AL603832.2-201ENST00000566195 2125 ntBASIC16.79■□□□□ 0.28
GRIA1P42261 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.79■□□□□ 0.28
GRIA1P42261 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
GRIA1P42261 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.79■□□□□ 0.28
GRIA1P42261 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
GRIA1P42261 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.79■□□□□ 0.28
GRIA1P42261 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 RNA5SP415-201ENST00000517246 115 ntBASIC16.79■□□□□ 0.28
GRIA1P42261 IGHV3-22-201ENST00000520721 359 ntBASIC16.79■□□□□ 0.28
GRIA1P42261 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.79■□□□□ 0.28
GRIA1P42261 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.79■□□□□ 0.28
GRIA1P42261 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIA1P42261 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIA1P42261 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 AC022188.1-201ENST00000620960 1664 ntBASIC16.78■□□□□ 0.28
GRIA1P42261 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms