Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDNFP39905 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDNFP39905 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDNFP39905 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
GDNFP39905 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
GDNFP39905 IGHV3-47-201ENST00000425060 335 ntBASIC14.49□□□□□ -0.09
GDNFP39905 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.49□□□□□ -0.09
GDNFP39905 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.49□□□□□ -0.09
GDNFP39905 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 BNIP3P18-201ENST00000593976 575 ntBASIC14.49□□□□□ -0.09
GDNFP39905 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.49□□□□□ -0.09
GDNFP39905 Z69720.1-201ENST00000601483 472 ntBASIC14.49□□□□□ -0.09
GDNFP39905 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.49□□□□□ -0.09
GDNFP39905 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 AL135999.2-201ENST00000622438 1686 ntBASIC14.49□□□□□ -0.09
GDNFP39905 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
GDNFP39905 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDNFP39905 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.49□□□□□ -0.09
GDNFP39905 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
GDNFP39905 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.48□□□□□ -0.09
GDNFP39905 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.48□□□□□ -0.09
GDNFP39905 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.48□□□□□ -0.09
GDNFP39905 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
GDNFP39905 AC092329.2-201ENST00000598402 547 ntBASIC14.48□□□□□ -0.09
GDNFP39905 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 AP005117.1-202ENST00000581724 1908 ntBASIC14.48□□□□□ -0.09
GDNFP39905 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms