Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGCLP35914 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGCLP35914 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGCLP35914 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HMGCLP35914 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGCLP35914 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCLP35914 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.45■□□□□ 0.22
HMGCLP35914 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
HMGCLP35914 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCLP35914 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 SPDYE11-202ENST00000450699 704 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCLP35914 SPDYE9P-201ENST00000570642 692 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 AC073389.1-201ENST00000595595 795 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 SPDYE10P-202ENST00000612005 668 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 SPDYE8P-202ENST00000612377 668 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCLP35914 AC008267.7-201ENST00000624570 1194 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 AC006449.5-201ENST00000610658 2098 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 PCDHB19P-201ENST00000570871 2371 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCLP35914 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCLP35914 AC005622.1-201ENST00000636801 1703 ntBASIC16.45■□□□□ 0.22
HMGCLP35914 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HMGCLP35914 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 U82695.1-201ENST00000635752 1889 ntBASIC16.44■□□□□ 0.22
HMGCLP35914 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 KRT18P13-201ENST00000400056 1290 ntBASIC16.44■□□□□ 0.22
HMGCLP35914 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCLP35914 PRYP6-201ENST00000514804 343 ntBASIC16.44■□□□□ 0.22
HMGCLP35914 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCLP35914 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.44■□□□□ 0.22
HMGCLP35914 AC105339.1-204ENST00000636249 355 ntBASIC16.44■□□□□ 0.22
HMGCLP35914 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HMGCLP35914 AL662844.4-201ENST00000606367 2838 ntBASIC16.44■□□□□ 0.22
HMGCLP35914 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCLP35914 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCLP35914 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCLP35914 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCLP35914 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms