Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT9P35527 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KRT9P35527 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT9P35527 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 AC010491.1-201ENST00000563101 2797 ntBASIC18.18■□□□□ 0.5
KRT9P35527 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 GGT4P-201ENST00000623672 1708 ntBASIC18.18■□□□□ 0.5
KRT9P35527 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
KRT9P35527 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.17■□□□□ 0.5
KRT9P35527 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 TSPY26P-202ENST00000565928 3884 ntBASIC18.17■□□□□ 0.5
KRT9P35527 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KRT9P35527 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT9P35527 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.17■□□□□ 0.5
KRT9P35527 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT9P35527 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 AL031731.1-201ENST00000642131 2094 ntBASIC18.17■□□□□ 0.5
KRT9P35527 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT9P35527 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KRT9P35527 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
KRT9P35527 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT9P35527 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT9P35527 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 LAGE3P1-201ENST00000425356 484 ntBASIC18.16■□□□□ 0.5
KRT9P35527 AL450487.1-201ENST00000426799 995 ntBASIC18.16■□□□□ 0.5
KRT9P35527 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.16■□□□□ 0.5
KRT9P35527 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT9P35527 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT9P35527 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT9P35527 RNPS1P1-201ENST00000507437 918 ntBASIC18.16■□□□□ 0.5
KRT9P35527 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.16■□□□□ 0.5
KRT9P35527 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT9P35527 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 AL121912.1-201ENST00000603683 238 ntBASIC18.16■□□□□ 0.5
KRT9P35527 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 AC107918.4-202ENST00000641623 219 ntBASIC18.16■□□□□ 0.5
KRT9P35527 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 AC006449.6-201ENST00000612330 2296 ntBASIC18.16■□□□□ 0.5
KRT9P35527 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT9P35527 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT9P35527 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT9P35527 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT9P35527 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KRT9P35527 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT9P35527 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT9P35527 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT9P35527 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 FAM197Y8-203ENST00000450145 560 ntBASIC18.15■□□□□ 0.5
KRT9P35527 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT9P35527 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT9P35527 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT9P35527 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT9P35527 OR7E14P-202ENST00000530490 1290 ntBASIC18.15■□□□□ 0.5
KRT9P35527 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.15■□□□□ 0.5
KRT9P35527 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT9P35527 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT9P35527 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms