Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.6■□□□□ 0.89
RFC4P35249 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RFC4P35249 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFC4P35249 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
RFC4P35249 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RFC4P35249 ANKRD19P-201ENST00000338192 862 ntBASIC20.6■□□□□ 0.89
RFC4P35249 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.6■□□□□ 0.89
RFC4P35249 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.6■□□□□ 0.89
RFC4P35249 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.6■□□□□ 0.89
RFC4P35249 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.6■□□□□ 0.89
RFC4P35249 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.6■□□□□ 0.89
RFC4P35249 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.6■□□□□ 0.89
RFC4P35249 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 BTNL10-201ENST00000595971 695 ntBASIC20.6■□□□□ 0.89
RFC4P35249 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RFC4P35249 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC4P35249 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC4P35249 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RFC4P35249 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 AL512652.2-201ENST00000625156 1716 ntBASIC20.59■□□□□ 0.89
RFC4P35249 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC4P35249 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 KRT43P-201ENST00000434019 910 ntBASIC20.59■□□□□ 0.89
RFC4P35249 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC4P35249 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC4P35249 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC4P35249 RARRES2P5-201ENST00000564013 466 ntBASIC20.59■□□□□ 0.89
RFC4P35249 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC4P35249 AC010319.3-201ENST00000597028 470 ntBASIC20.59■□□□□ 0.89
RFC4P35249 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RFC4P35249 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RFC4P35249 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFC4P35249 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RFC4P35249 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC4P35249 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC4P35249 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC4P35249 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RFC4P35249 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC4P35249 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC4P35249 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC4P35249 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.58■□□□□ 0.89
RFC4P35249 AL139011.1-202ENST00000642063 584 ntBASIC20.58■□□□□ 0.89
RFC4P35249 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC4P35249 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC4P35249 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RFC4P35249 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RFC4P35249 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 AC134043.2-201ENST00000624206 2238 ntBASIC20.58■□□□□ 0.88
RFC4P35249 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RFC4P35249 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.58■□□□□ 0.88
RFC4P35249 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC4P35249 CROCCP2-202ENST00000412962 2773 ntBASIC20.57■□□□□ 0.88
RFC4P35249 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms