Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AC003101.2-201ENST00000612557 442 ntBASIC15.89■□□□□ 0.13
CCKBRP32239 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.89■□□□□ 0.13
CCKBRP32239 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
CCKBRP32239 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.89■□□□□ 0.13
CCKBRP32239 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCKBRP32239 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.89■□□□□ 0.13
CCKBRP32239 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 AL035456.1-201ENST00000456064 1369 ntBASIC15.88■□□□□ 0.13
CCKBRP32239 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CCKBRP32239 AL645608.8-201ENST00000606034 2086 ntBASIC15.88■□□□□ 0.13
CCKBRP32239 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.88■□□□□ 0.13
CCKBRP32239 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 PIN1P1-201ENST00000412108 996 ntBASIC15.88■□□□□ 0.13
CCKBRP32239 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.88■□□□□ 0.13
CCKBRP32239 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.88■□□□□ 0.13
CCKBRP32239 SPDYE12P-201ENST00000618416 771 ntBASIC15.88■□□□□ 0.13
CCKBRP32239 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.88■□□□□ 0.13
CCKBRP32239 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCKBRP32239 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.88■□□□□ 0.13
CCKBRP32239 AC022144.1-201ENST00000602255 1580 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 AC108860.2-201ENST00000562760 2183 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.87■□□□□ 0.13
CCKBRP32239 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.87■□□□□ 0.13
CCKBRP32239 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.87■□□□□ 0.13
CCKBRP32239 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.87■□□□□ 0.13
CCKBRP32239 AC124947.2-201ENST00000547118 1133 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.87■□□□□ 0.13
CCKBRP32239 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 AL138828.2-201ENST00000615812 383 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCKBRP32239 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.87■□□□□ 0.13
CCKBRP32239 TUBB8P12-201ENST00000308911 1335 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 TUBB7P-202ENST00000428444 1305 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 TUBB8P7-204ENST00000567960 1332 ntBASIC15.87■□□□□ 0.13
CCKBRP32239 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCKBRP32239 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCKBRP32239 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCKBRP32239 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
CCKBRP32239 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCKBRP32239 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCKBRP32239 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.86■□□□□ 0.13
CCKBRP32239 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCKBRP32239 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCKBRP32239 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCKBRP32239 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCKBRP32239 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCKBRP32239 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms