Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL8A2P25067 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14□□□□□ -0.17
COL8A2P25067 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
COL8A2P25067 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL8A2P25067 KRT8P39-201ENST00000396270 1433 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 SNX33P1-201ENST00000592116 1762 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
COL8A2P25067 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.99□□□□□ -0.17
COL8A2P25067 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 PCDHB19P-201ENST00000570871 2371 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 MIR346-201ENST00000362234 95 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 MIR770-201ENST00000390219 98 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.99□□□□□ -0.17
COL8A2P25067 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 AP000842.3-202ENST00000569238 1080 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.99□□□□□ -0.17
COL8A2P25067 AC084121.4-201ENST00000641598 221 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 AF228730.8-201ENST00000642140 221 ntBASIC13.99□□□□□ -0.17
COL8A2P25067 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.99□□□□□ -0.17
COL8A2P25067 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.99□□□□□ -0.17
COL8A2P25067 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
COL8A2P25067 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL8A2P25067 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.99□□□□□ -0.17
COL8A2P25067 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL8A2P25067 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.98□□□□□ -0.17
COL8A2P25067 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.98□□□□□ -0.17
COL8A2P25067 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 AC026150.2-201ENST00000564693 1156 ntBASIC13.98□□□□□ -0.17
COL8A2P25067 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.98□□□□□ -0.17
COL8A2P25067 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 AP001059.3-201ENST00000619053 235 ntBASIC13.98□□□□□ -0.17
COL8A2P25067 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
COL8A2P25067 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL8A2P25067 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.98□□□□□ -0.17
COL8A2P25067 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL8A2P25067 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
COL8A2P25067 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms