Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 QARS-225ENST00000634336 486 ntTSL 511.01□□□□□ -0.651e-12■■□□□ 13.5
RPS3P23396 COPG1-208ENST00000513965 730 ntTSL 210.75□□□□□ -0.698e-9■■□□□ 13.5
RPS3P23396 QARS-229ENST00000634473 643 ntTSL 510.18□□□□□ -0.781e-12■■□□□ 13.5
RPS3P23396 ACADVL-216ENST00000578824 720 ntTSL 210.15□□□□□ -0.783e-6■■□□□ 13.5
RPS3P23396 QARS-223ENST00000494984 679 ntTSL 29.18□□□□□ -0.941e-12■■□□□ 13.5
RPS3P23396 COPG1-202ENST00000504350 672 ntTSL 36.12□□□□□ -1.438e-9■■□□□ 13.5
RPS3P23396 QARS-210ENST00000466179 334 ntTSL 34.96□□□□□ -1.621e-12■■□□□ 13.5
RPS3P23396 PPIH-206ENST00000461351 527 ntTSL 35.77□□□□□ -1.491e-6■■□□□ 13.5
RPS3P23396 NECTIN2-205ENST00000591581 950 ntTSL 213.67□□□□□ -0.226e-15■■□□□ 13.5
RPS3P23396 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.27■■□□□ 11e-10■■□□□ 13.5
RPS3P23396 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-10■■□□□ 13.5
RPS3P23396 ARL8B-203ENST00000429403 709 ntTSL 518.31■□□□□ 0.523e-6■■□□□ 13.5
RPS3P23396 ARL8B-204ENST00000444332 732 ntTSL 217.81■□□□□ 0.443e-6■■□□□ 13.5
RPS3P23396 ARL8B-205ENST00000455168 1641 ntTSL 216.91■□□□□ 0.33e-6■■□□□ 13.5
RPS3P23396 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.113e-6■■□□□ 13.5
RPS3P23396 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.033e-6■■□□□ 13.5
RPS3P23396 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC13.21□□□□□ -0.293e-6■■□□□ 13.5
RPS3P23396 NDC80-204ENST00000575515 553 ntTSL 59.64□□□□□ -0.873e-7■■□□□ 13.5
RPS3P23396 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.343e-7■■□□□ 13.5
RPS3P23396 CFB-280ENST00000482312 764 ntTSL 27.96□□□□□ -1.142e-6■■□□□ 13.5
RPS3P23396 SEC31A-216ENST00000505479 631 ntTSL 24.78□□□□□ -1.643e-7■■□□□ 13.5
RPS3P23396 SEC31A-240ENST00000515062 597 ntTSL 32.91□□□□□ -1.943e-7■■□□□ 13.5
RPS3P23396 TNPO1-213ENST00000523768 2632 ntTSL 2 BASIC11.17□□□□□ -0.622e-6■■□□□ 13.5
RPS3P23396 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC9.24□□□□□ -0.931e-9■■□□□ 13.5
RPS3P23396 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.74□□□□□ -1.172e-6■■□□□ 13.5
RPS3P23396 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.252e-6■■□□□ 13.5
RPS3P23396 TMEM132A-203ENST00000534983 2477 ntTSL 1 (best)19.1■□□□□ 0.651e-7■■□□□ 13.5
RPS3P23396 TMEM132A-214ENST00000544098 3981 ntTSL 1 (best)14.13□□□□□ -0.151e-7■■□□□ 13.5
RPS3P23396 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.77■□□□□ 0.122e-11■■□□□ 13.5
RPS3P23396 EIF5A-210ENST00000575001 609 ntTSL 222.33■■□□□ 1.177e-10■■□□□ 13.5
RPS3P23396 EIF5A-203ENST00000355068 923 ntTSL 26.94□□□□□ -1.37e-10■■□□□ 13.5
RPS3P23396 TM9SF1-210ENST00000530563 721 ntTSL 39.99□□□□□ -0.813e-7■■□□□ 13.5
RPS3P23396 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.251e-8■■□□□ 13.5
RPS3P23396 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.111e-8■■□□□ 13.5
RPS3P23396 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.111e-8■■□□□ 13.5
RPS3P23396 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.011e-8■■□□□ 13.5
RPS3P23396 GLMP-204ENST00000472870 1188 ntTSL 513.74□□□□□ -0.211e-8■■□□□ 13.5
RPS3P23396 PRMT1-211ENST00000528623 543 ntTSL 312.23□□□□□ -0.452e-6■■□□□ 13.5
RPS3P23396 TPI1-207ENST00000493987 839 ntTSL 310.73□□□□□ -0.697e-9■■□□□ 13.5
RPS3P23396 P4HB-202ENST00000415593 1669 ntTSL 1 (best)17.07■□□□□ 0.321e-22■■□□□ 13.5
RPS3P23396 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.08□□□□□ -0.483e-50■■□□□ 13.5
RPS3P23396 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.72□□□□□ -0.533e-50■■□□□ 13.5
RPS3P23396 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.53□□□□□ -0.563e-50■■□□□ 13.5
RPS3P23396 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.15□□□□□ -0.623e-50■■□□□ 13.5
RPS3P23396 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.76□□□□□ -0.693e-50■■□□□ 13.5
RPS3P23396 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC10.68□□□□□ -0.73e-50■■□□□ 13.5
RPS3P23396 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC10.61□□□□□ -0.713e-50■■□□□ 13.5
RPS3P23396 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10.44□□□□□ -0.743e-50■■□□□ 13.5
RPS3P23396 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.743e-50■■□□□ 13.5
RPS3P23396 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC9.37□□□□□ -0.913e-50■■□□□ 13.5
RPS3P23396 ZFAS1-207ENST00000458653 596 ntTSL 227.57■■■□□ 23e-17■■□□□ 13.5
RPS3P23396 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)24.35■■□□□ 1.493e-17■■□□□ 13.5
RPS3P23396 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)22.96■■□□□ 1.273e-17■■□□□ 13.5
RPS3P23396 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)21.18■□□□□ 0.983e-17■■□□□ 13.5
RPS3P23396 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.18■□□□□ 0.983e-17■■□□□ 13.5
RPS3P23396 SEC13-206ENST00000397102 582 ntTSL 314.08□□□□□ -0.168e-23■■□□□ 13.5
RPS3P23396 SEC13-204ENST00000397099 555 ntTSL 413.55□□□□□ -0.248e-23■■□□□ 13.5
RPS3P23396 LAMTOR4-204ENST00000466498 371 ntTSL 213.4□□□□□ -0.268e-9■■□□□ 13.5
RPS3P23396 QARS-231ENST00000634602 544 ntTSL 413.28□□□□□ -0.288e-9■■□□□ 13.5
RPS3P23396 SEC13-205ENST00000397101 592 ntTSL 213.22□□□□□ -0.298e-23■■□□□ 13.5
RPS3P23396 QARS-242ENST00000635443 1053 ntTSL 513.13□□□□□ -0.318e-9■■□□□ 13.5
RPS3P23396 QARS-217ENST00000482261 1149 ntTSL 513.06□□□□□ -0.328e-9■■□□□ 13.5
RPS3P23396 QARS-221ENST00000494767 1023 ntTSL 513.06□□□□□ -0.328e-9■■□□□ 13.5
RPS3P23396 QARS-212ENST00000470225 691 ntTSL 512.77□□□□□ -0.378e-9■■□□□ 13.5
RPS3P23396 XPO1-214ENST00000461407 2676 ntTSL 212.54□□□□□ -0.43e-17■■□□□ 13.5
RPS3P23396 QARS-245ENST00000635541 907 ntTSL 312.03□□□□□ -0.488e-9■■□□□ 13.5
RPS3P23396 QARS-241ENST00000635375 947 ntTSL 311.61□□□□□ -0.558e-9■■□□□ 13.5
RPS3P23396 QARS-246ENST00000635622 701 ntTSL 311.48□□□□□ -0.578e-9■■□□□ 13.5
RPS3P23396 QARS-222ENST00000494838 959 ntTSL 311.33□□□□□ -0.68e-9■■□□□ 13.5
RPS3P23396 QARS-244ENST00000635501 1290 ntTSL 211.3□□□□□ -0.68e-9■■□□□ 13.5
RPS3P23396 QARS-234ENST00000634802 599 ntTSL 410.82□□□□□ -0.688e-9■■□□□ 13.5
RPS3P23396 QARS-236ENST00000635052 570 ntTSL 510.57□□□□□ -0.728e-9■■□□□ 13.5
RPS3P23396 QARS-230ENST00000634527 732 ntTSL 510.53□□□□□ -0.728e-9■■□□□ 13.5
RPS3P23396 QARS-238ENST00000635231 578 ntTSL 49.91□□□□□ -0.828e-9■■□□□ 13.5
RPS3P23396 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC9.91□□□□□ -0.823e-17■■□□□ 13.5
RPS3P23396 QARS-213ENST00000470619 876 ntTSL 49.73□□□□□ -0.858e-9■■□□□ 13.5
RPS3P23396 QARS-206ENST00000452739 1044 ntTSL 59.69□□□□□ -0.868e-9■■□□□ 13.5
RPS3P23396 XPO1-222ENST00000492182 827 ntTSL 29.38□□□□□ -0.913e-17■■□□□ 13.5
RPS3P23396 QARS-240ENST00000635292 574 ntTSL 48.19□□□□□ -1.18e-9■■□□□ 13.5
RPS3P23396 ZFAS1-209ENST00000620594 508 ntTSL 37.45□□□□□ -1.223e-17■■□□□ 13.5
RPS3P23396 IMMT-205ENST00000419070 2172 ntTSL 57.16□□□□□ -1.268e-9■■□□□ 13.5
RPS3P23396 IMMT-211ENST00000490238 699 ntTSL 46.9□□□□□ -1.38e-9■■□□□ 13.5
RPS3P23396 ZFAS1-204ENST00000428008 566 ntTSL 26.82□□□□□ -1.323e-17■■□□□ 13.5
RPS3P23396 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)6.7□□□□□ -1.343e-17■■□□□ 13.5
RPS3P23396 MRPL52-209ENST00000553965 327 ntTSL 23.88□□□□□ -1.798e-9■■□□□ 13.5
RPS3P23396 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.328e-9■■□□□ 13.5
RPS3P23396 XPO1-223ENST00000494468 562 ntTSL 30.26□□□□□ -2.373e-17■■□□□ 13.5
RPS3P23396 FDPS-212ENST00000487002 2017 ntTSL 216.79■□□□□ 0.282e-8■■□□□ 13.5
RPS3P23396 AKR1C3-206ENST00000602997 636 ntTSL 34.58□□□□□ -1.681e-7■■□□□ 13.5
RPS3P23396 AKR1C3-210ENST00000605322 846 ntTSL 1 (best)4.44□□□□□ -1.71e-7■■□□□ 13.5
RPS3P23396 FN1-221ENST00000480737 384 ntTSL 22.53□□□□□ -23e-67■■□□□ 13.5
RPS3P23396 UNC13D-206ENST00000586519 403 ntTSL 516.1■□□□□ 0.172e-6■■□□□ 13.5
RPS3P23396 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.127e-8■■□□□ 13.5
RPS3P23396 ATXN2L-211ENST00000563314 4574 ntTSL 514.13□□□□□ -0.157e-8■■□□□ 13.5
RPS3P23396 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.157e-8■■□□□ 13.5
RPS3P23396 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.37e-8■■□□□ 13.5
RPS3P23396 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.377e-8■■□□□ 13.5
RPS3P23396 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.377e-8■■□□□ 13.5
RPS3P23396 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.427e-8■■□□□ 13.5
RPS3P23396 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.447e-8■■□□□ 13.5
Retrieved 100 of 24,271 protein–RNA pairs in 220.8 ms