Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHBP21953 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
BCKDHBP21953 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.25■□□□□ 0.19
BCKDHBP21953 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.25■□□□□ 0.19
BCKDHBP21953 AC123567.1-201ENST00000548294 1261 ntBASIC16.25■□□□□ 0.19
BCKDHBP21953 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
BCKDHBP21953 AC061975.2-201ENST00000581722 295 ntBASIC16.25■□□□□ 0.19
BCKDHBP21953 MIR4259-201ENST00000584466 101 ntBASIC16.25■□□□□ 0.19
BCKDHBP21953 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.25■□□□□ 0.19
BCKDHBP21953 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.25■□□□□ 0.19
BCKDHBP21953 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHBP21953 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.25■□□□□ 0.19
BCKDHBP21953 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHBP21953 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHBP21953 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 SDHAP3-202ENST00000515467 728 ntBASIC16.24■□□□□ 0.19
BCKDHBP21953 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AL512343.1-201ENST00000605837 169 ntBASIC16.24■□□□□ 0.19
BCKDHBP21953 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BCKDHBP21953 PCDHB17P-201ENST00000539533 2393 ntBASIC16.24■□□□□ 0.19
BCKDHBP21953 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 AL589702.1-201ENST00000641229 1509 ntBASIC16.24■□□□□ 0.19
BCKDHBP21953 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHBP21953 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHBP21953 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHBP21953 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.23■□□□□ 0.19
BCKDHBP21953 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BCKDHBP21953 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.23■□□□□ 0.19
BCKDHBP21953 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
BCKDHBP21953 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.23■□□□□ 0.19
BCKDHBP21953 SPDYE17-201ENST00000412399 783 ntBASIC16.23■□□□□ 0.19
BCKDHBP21953 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BCKDHBP21953 AC024267.1-201ENST00000582320 895 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms