Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRT4P19013 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRT4P19013 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT4P19013 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 DRAXINP1-201ENST00000437611 948 ntBASIC16.68■□□□□ 0.26
KRT4P19013 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT4P19013 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 AC010331.1-201ENST00000611423 582 ntBASIC16.68■□□□□ 0.26
KRT4P19013 AL590326.2-201ENST00000625139 305 ntBASIC16.68■□□□□ 0.26
KRT4P19013 AC066615.1-201ENST00000640911 628 ntBASIC16.68■□□□□ 0.26
KRT4P19013 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT4P19013 AC063926.3-201ENST00000624734 5658 ntBASIC16.68■□□□□ 0.26
KRT4P19013 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 AC068587.6-202ENST00000641839 5619 ntBASIC16.68■□□□□ 0.26
KRT4P19013 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT4P19013 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT4P19013 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
KRT4P19013 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT4P19013 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.67■□□□□ 0.26
KRT4P19013 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KRT4P19013 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT4P19013 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT4P19013 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 LINC02447-202ENST00000501888 2146 ntBASIC16.67■□□□□ 0.26
KRT4P19013 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 CDC14C-201ENST00000428251 1719 ntBASIC16.67■□□□□ 0.26
KRT4P19013 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
KRT4P19013 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
KRT4P19013 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
KRT4P19013 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT4P19013 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT4P19013 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 AC112504.1-201ENST00000623415 1841 ntBASIC16.66■□□□□ 0.26
KRT4P19013 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT4P19013 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KRT4P19013 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT4P19013 AC211429.1-201ENST00000415277 523 ntBASIC16.66■□□□□ 0.26
KRT4P19013 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT4P19013 IGHV3-47-201ENST00000425060 335 ntBASIC16.66■□□□□ 0.26
KRT4P19013 ABCD1P5-201ENST00000445663 754 ntBASIC16.66■□□□□ 0.26
KRT4P19013 TOB2P1-201ENST00000469761 992 ntBASIC16.66■□□□□ 0.26
KRT4P19013 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms