Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 UNC93B6-202ENST00000528242 690 ntBASIC17.42■□□□□ 0.38
RARAP10276 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RARAP10276 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.42■□□□□ 0.38
RARAP10276 AC087641.1-201ENST00000557561 1021 ntBASIC17.42■□□□□ 0.38
RARAP10276 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.42■□□□□ 0.38
RARAP10276 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.42■□□□□ 0.38
RARAP10276 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RARAP10276 ACTL9-202ENST00000612068 1252 ntBASIC17.42■□□□□ 0.38
RARAP10276 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.42■□□□□ 0.38
RARAP10276 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.42■□□□□ 0.38
RARAP10276 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.42■□□□□ 0.38
RARAP10276 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 HLA-A-201ENST00000376802 1334 ntBASIC17.42■□□□□ 0.38
RARAP10276 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RARAP10276 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.42■□□□□ 0.38
RARAP10276 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARAP10276 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 AL031731.1-201ENST00000642131 2094 ntBASIC17.41■□□□□ 0.38
RARAP10276 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.41■□□□□ 0.38
RARAP10276 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.41■□□□□ 0.38
RARAP10276 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RARAP10276 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.41■□□□□ 0.38
RARAP10276 FAM185BP-201ENST00000443595 716 ntBASIC17.41■□□□□ 0.38
RARAP10276 AC093909.1-201ENST00000504731 1122 ntBASIC17.41■□□□□ 0.38
RARAP10276 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 AL662844.1-201ENST00000546340 181 ntBASIC17.41■□□□□ 0.38
RARAP10276 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.41■□□□□ 0.38
RARAP10276 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
RARAP10276 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RARAP10276 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RARAP10276 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.41■□□□□ 0.38
RARAP10276 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 GGT4P-201ENST00000623672 1708 ntBASIC17.41■□□□□ 0.38
RARAP10276 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARAP10276 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARAP10276 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
RARAP10276 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.4■□□□□ 0.38
RARAP10276 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.4■□□□□ 0.38
RARAP10276 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RARAP10276 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.4■□□□□ 0.38
RARAP10276 HCG4-201ENST00000418983 998 ntBASIC17.4■□□□□ 0.38
RARAP10276 PRSS29P-201ENST00000440800 595 ntBASIC17.4■□□□□ 0.38
RARAP10276 AC009947.1-201ENST00000444350 727 ntBASIC17.4■□□□□ 0.38
RARAP10276 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 IGHV3-22-201ENST00000520721 359 ntBASIC17.4■□□□□ 0.38
RARAP10276 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.4■□□□□ 0.38
RARAP10276 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RARAP10276 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RARAP10276 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RARAP10276 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RARAP10276 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms