Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGHV3-43DP0DP04 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 MIR4492-201ENST00000581627 80 ntBASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AL049840.3-201ENST00000602669 611 ntBASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AC008667.4-201ENST00000607370 168 ntBASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AC004790.2-201ENST00000623588 572 ntBASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AL512652.2-201ENST00000625156 1716 ntBASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGHV3-43DP0DP04 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 RPS2P28-201ENST00000314255 741 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 AC108073.2-201ENST00000464002 357 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 IGHV3-65-201ENST00000523210 341 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 AC091167.2-201ENST00000579581 588 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 CYP2A7P1-201ENST00000595391 815 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 AC117500.6-201ENST00000624871 588 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 FAM215A-202ENST00000632077 792 ntBASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.8□□□□□ -0.2
IGHV3-43DP0DP04 AL139011.1-202ENST00000642063 584 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms