Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC013268.4-201ENST00000637413 2228 ntBASIC13.81□□□□□ -0.2
CTSDP07339 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CTSDP07339 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSDP07339 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSDP07339 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSDP07339 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 AC063952.2-201ENST00000498792 1227 ntBASIC13.81□□□□□ -0.2
CTSDP07339 AC022616.7-201ENST00000525383 220 ntBASIC13.81□□□□□ -0.2
CTSDP07339 KRT8P26-201ENST00000534154 1276 ntBASIC13.81□□□□□ -0.2
CTSDP07339 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSDP07339 AL049597.2-201ENST00000565575 961 ntBASIC13.81□□□□□ -0.2
CTSDP07339 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.81□□□□□ -0.2
CTSDP07339 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSDP07339 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 AP000867.4-201ENST00000641616 219 ntBASIC13.81□□□□□ -0.2
CTSDP07339 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSDP07339 SIGLEC16-201ENST00000599858 1437 ntBASIC13.81□□□□□ -0.2
CTSDP07339 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSDP07339 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.8□□□□□ -0.2
CTSDP07339 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
CTSDP07339 AC091607.1-201ENST00000490318 1060 ntBASIC13.8□□□□□ -0.2
CTSDP07339 AC011498.5-201ENST00000592027 486 ntBASIC13.8□□□□□ -0.2
CTSDP07339 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.8□□□□□ -0.2
CTSDP07339 AC069224.1-201ENST00000566372 1715 ntBASIC13.8□□□□□ -0.2
CTSDP07339 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 AL590787.1-201ENST00000568856 1315 ntBASIC13.8□□□□□ -0.2
CTSDP07339 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CTSDP07339 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTSDP07339 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.8□□□□□ -0.2
CTSDP07339 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTSDP07339 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.8□□□□□ -0.2
CTSDP07339 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.8□□□□□ -0.2
CTSDP07339 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.79□□□□□ -0.2
CTSDP07339 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CTSDP07339 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms