Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AC005915.1-201ENST00000624912 2018 ntBASIC19.41■□□□□ 0.7
HLA-DOAP06340 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 BANF1P1-201ENST00000553684 263 ntBASIC19.41■□□□□ 0.7
HLA-DOAP06340 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOAP06340 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOAP06340 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 MRPS18AP1-201ENST00000414458 589 ntBASIC19.4■□□□□ 0.7
HLA-DOAP06340 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 AC009118.2-201ENST00000613275 655 ntBASIC19.4■□□□□ 0.7
HLA-DOAP06340 TEX28P1-201ENST00000613479 1221 ntBASIC19.4■□□□□ 0.7
HLA-DOAP06340 TEX28P2-201ENST00000617764 1221 ntBASIC19.4■□□□□ 0.7
HLA-DOAP06340 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOAP06340 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HLA-DOAP06340 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DOAP06340 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DOAP06340 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DOAP06340 PCGF3-213ENST00000620529 1899 ntBASIC19.39■□□□□ 0.7
HLA-DOAP06340 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DOAP06340 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DOAP06340 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms