Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC133539.2-201ENST00000604757 467 ntBASIC21.42■■□□□ 1.02
COL5A2P05997 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL5A2P05997 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 BRWD1P1-201ENST00000401091 371 ntBASIC21.41■■□□□ 1.02
COL5A2P05997 FAM21FP-201ENST00000426241 1131 ntBASIC21.41■■□□□ 1.02
COL5A2P05997 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.41■■□□□ 1.02
COL5A2P05997 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 AP000812.2-201ENST00000538934 718 ntBASIC21.41■■□□□ 1.02
COL5A2P05997 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.41■■□□□ 1.02
COL5A2P05997 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 AL365330.1-201ENST00000607459 531 ntBASIC21.41■■□□□ 1.02
COL5A2P05997 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.41■■□□□ 1.02
COL5A2P05997 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.41■■□□□ 1.02
COL5A2P05997 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.41■■□□□ 1.02
COL5A2P05997 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL5A2P05997 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 AP001889.1-201ENST00000525414 633 ntBASIC21.4■■□□□ 1.02
COL5A2P05997 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.4■■□□□ 1.02
COL5A2P05997 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.4■■□□□ 1.02
COL5A2P05997 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.4■■□□□ 1.02
COL5A2P05997 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 INTS4P2-202ENST00000614726 2019 ntBASIC21.4■■□□□ 1.02
COL5A2P05997 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.4■■□□□ 1.02
COL5A2P05997 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.4■■□□□ 1.02
COL5A2P05997 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 PCGF3-213ENST00000620529 1899 ntBASIC21.4■■□□□ 1.02
COL5A2P05997 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL5A2P05997 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.39■■□□□ 1.02
COL5A2P05997 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.39■■□□□ 1.02
COL5A2P05997 BCRP2-202ENST00000447763 634 ntBASIC21.39■■□□□ 1.02
COL5A2P05997 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.39■■□□□ 1.02
COL5A2P05997 BCRP6-201ENST00000510112 632 ntBASIC21.39■■□□□ 1.02
COL5A2P05997 BCRP7-201ENST00000511549 544 ntBASIC21.39■■□□□ 1.02
COL5A2P05997 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.39■■□□□ 1.02
COL5A2P05997 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.39■■□□□ 1.02
COL5A2P05997 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.39■■□□□ 1.02
COL5A2P05997 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.39■■□□□ 1.02
COL5A2P05997 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL5A2P05997 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
COL5A2P05997 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.39■■□□□ 1.01
COL5A2P05997 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.39■■□□□ 1.01
COL5A2P05997 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.39■■□□□ 1.01
COL5A2P05997 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.39■■□□□ 1.01
COL5A2P05997 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 AL139099.5-201ENST00000635274 300 ntBASIC21.39■■□□□ 1.01
COL5A2P05997 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL5A2P05997 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.39■■□□□ 1.01
COL5A2P05997 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.38■■□□□ 1.01
COL5A2P05997 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
COL5A2P05997 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms