Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
APOC1P02654 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.73□□□□□ -0.05
APOC1P02654 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.73□□□□□ -0.05
APOC1P02654 SART3-203ENST00000546611 1184 ntBASIC14.73□□□□□ -0.05
APOC1P02654 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 AC091167.2-201ENST00000579581 588 ntBASIC14.73□□□□□ -0.05
APOC1P02654 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
APOC1P02654 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 AL805961.1-202ENST00000641562 540 ntBASIC14.73□□□□□ -0.05
APOC1P02654 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.73□□□□□ -0.05
APOC1P02654 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 PI4KAP1-204ENST00000612579 1703 ntBASIC14.72□□□□□ -0.05
APOC1P02654 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.72□□□□□ -0.05
APOC1P02654 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.72□□□□□ -0.05
APOC1P02654 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.72□□□□□ -0.05
APOC1P02654 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.72□□□□□ -0.05
APOC1P02654 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
APOC1P02654 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 AC099063.4-201ENST00000641099 1602 ntBASIC14.72□□□□□ -0.05
APOC1P02654 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
APOC1P02654 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC1P02654 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC1P02654 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms