Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL2A1P02458 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 AC004987.2-201ENST00000395959 1148 ntBASIC19.05■□□□□ 0.64
COL2A1P02458 AL512384.1-201ENST00000406683 331 ntBASIC19.05■□□□□ 0.64
COL2A1P02458 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.05■□□□□ 0.64
COL2A1P02458 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.05■□□□□ 0.64
COL2A1P02458 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.05■□□□□ 0.64
COL2A1P02458 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.05■□□□□ 0.64
COL2A1P02458 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL2A1P02458 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL2A1P02458 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL2A1P02458 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL2A1P02458 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.05■□□□□ 0.64
COL2A1P02458 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL2A1P02458 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
COL2A1P02458 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.04■□□□□ 0.64
COL2A1P02458 AC079776.1-201ENST00000401540 1152 ntBASIC19.04■□□□□ 0.64
COL2A1P02458 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL2A1P02458 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 ELK1P1-201ENST00000485699 580 ntBASIC19.04■□□□□ 0.64
COL2A1P02458 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.04■□□□□ 0.64
COL2A1P02458 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL2A1P02458 LETM1P2-201ENST00000597330 2178 ntBASIC19.04■□□□□ 0.64
COL2A1P02458 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
COL2A1P02458 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 RNF216P1-203ENST00000404404 2427 ntBASIC19.04■□□□□ 0.64
COL2A1P02458 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.04■□□□□ 0.64
COL2A1P02458 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL2A1P02458 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COL2A1P02458 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.03■□□□□ 0.64
COL2A1P02458 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 AC243562.2-201ENST00000561247 970 ntBASIC19.03■□□□□ 0.64
COL2A1P02458 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 AL691432.1-201ENST00000596308 1422 ntBASIC19.03■□□□□ 0.64
COL2A1P02458 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.03■□□□□ 0.64
COL2A1P02458 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.03■□□□□ 0.64
COL2A1P02458 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL2A1P02458 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms