Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 WDR7-208ENST00000589935 544 ntTSL 4 BASIC7.25□□□□□ -1.25
USH2AO75445 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 FOS-208ENST00000555686 1496 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 LYSMD4-203ENST00000378904 2122 ntBASIC7.25□□□□□ -1.25
USH2AO75445 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 CMC1-204ENST00000423894 549 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 AC012362.1-201ENST00000434906 739 ntBASIC7.25□□□□□ -1.25
USH2AO75445 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 AC079316.1-201ENST00000548397 411 ntBASIC7.25□□□□□ -1.25
USH2AO75445 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 LINC00304-203ENST00000565008 1864 ntBASIC7.25□□□□□ -1.25
USH2AO75445 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
USH2AO75445 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 FAM197Y7-201ENST00000432892 766 ntBASIC7.25□□□□□ -1.25
USH2AO75445 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC7.25□□□□□ -1.25
USH2AO75445 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
USH2AO75445 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC7.25□□□□□ -1.25
USH2AO75445 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USH2AO75445 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC7.24□□□□□ -1.25
USH2AO75445 IQSEC3P1-201ENST00000538799 536 ntBASIC7.24□□□□□ -1.25
USH2AO75445 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 RN7SL736P-201ENST00000613111 269 ntBASIC7.24□□□□□ -1.25
USH2AO75445 PRSS30P-206ENST00000641773 873 ntBASIC7.24□□□□□ -1.25
USH2AO75445 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC7.24□□□□□ -1.25
USH2AO75445 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
USH2AO75445 TOP3BP1-201ENST00000420768 1380 ntBASIC7.24□□□□□ -1.25
USH2AO75445 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 PARVG-202ENST00000415224 999 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC7.24□□□□□ -1.25
USH2AO75445 EEF1DP6-201ENST00000449232 372 ntBASIC7.24□□□□□ -1.25
USH2AO75445 NUP210P1-202ENST00000504322 710 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC7.24□□□□□ -1.25
USH2AO75445 AC023310.1-201ENST00000554836 735 ntBASIC7.24□□□□□ -1.25
USH2AO75445 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 USP49-202ENST00000373010 2446 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 AC008132.1-202ENST00000342005 1389 ntBASIC7.24□□□□□ -1.25
USH2AO75445 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms