Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.36■□□□□ 0.37
OPHN1O60890 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
OPHN1O60890 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 KRT8P49-201ENST00000604166 1432 ntBASIC17.36■□□□□ 0.37
OPHN1O60890 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 AC008741.2-201ENST00000612792 3115 ntBASIC17.36■□□□□ 0.37
OPHN1O60890 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 PCDHB19P-201ENST00000570871 2371 ntBASIC17.36■□□□□ 0.37
OPHN1O60890 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.36■□□□□ 0.37
OPHN1O60890 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
OPHN1O60890 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPHN1O60890 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
OPHN1O60890 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
OPHN1O60890 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
OPHN1O60890 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 MKNK2P1-201ENST00000437526 628 ntBASIC17.35■□□□□ 0.37
OPHN1O60890 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.35■□□□□ 0.37
OPHN1O60890 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.35■□□□□ 0.37
OPHN1O60890 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.35■□□□□ 0.37
OPHN1O60890 AC011467.4-201ENST00000594891 528 ntBASIC17.35■□□□□ 0.37
OPHN1O60890 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.35■□□□□ 0.37
OPHN1O60890 TSPY26P-202ENST00000565928 3884 ntBASIC17.35■□□□□ 0.37
OPHN1O60890 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 LINC00895-201ENST00000629028 1637 ntBASIC17.35■□□□□ 0.37
OPHN1O60890 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
OPHN1O60890 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
OPHN1O60890 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.35■□□□□ 0.37
OPHN1O60890 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
OPHN1O60890 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.34■□□□□ 0.37
OPHN1O60890 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
OPHN1O60890 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
OPHN1O60890 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.34■□□□□ 0.37
OPHN1O60890 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.34■□□□□ 0.37
OPHN1O60890 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.34■□□□□ 0.37
OPHN1O60890 AL391256.1-201ENST00000443260 1855 ntBASIC17.34■□□□□ 0.37
OPHN1O60890 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
OPHN1O60890 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.34■□□□□ 0.37
OPHN1O60890 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.34■□□□□ 0.37
OPHN1O60890 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.34■□□□□ 0.37
OPHN1O60890 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 AC004706.3-202ENST00000621574 984 ntBASIC17.34■□□□□ 0.37
OPHN1O60890 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.34■□□□□ 0.37
OPHN1O60890 AC092865.6-201ENST00000642101 219 ntBASIC17.34■□□□□ 0.37
OPHN1O60890 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
OPHN1O60890 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OPHN1O60890 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
OPHN1O60890 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
OPHN1O60890 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
OPHN1O60890 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.33■□□□□ 0.37
OPHN1O60890 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms