Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 KRT18P3-201ENST00000451602 1288 ntBASIC15.92■□□□□ 0.14
PRAMEF4O60810 POU5F1P6-201ENST00000466990 990 ntBASIC15.92■□□□□ 0.14
PRAMEF4O60810 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEF4O60810 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEF4O60810 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 PDPK2P-202ENST00000562415 1191 ntBASIC15.91■□□□□ 0.14
PRAMEF4O60810 AP002472.1-201ENST00000577490 586 ntBASIC15.91■□□□□ 0.14
PRAMEF4O60810 AC027601.4-201ENST00000611259 610 ntBASIC15.91■□□□□ 0.14
PRAMEF4O60810 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 AC005622.1-201ENST00000636801 1703 ntBASIC15.91■□□□□ 0.14
PRAMEF4O60810 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEF4O60810 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEF4O60810 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 MED15P5-201ENST00000423150 992 ntBASIC15.9■□□□□ 0.14
PRAMEF4O60810 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 AL671883.3-201ENST00000603274 991 ntBASIC15.9■□□□□ 0.14
PRAMEF4O60810 FAM197Y3-203ENST00000618346 717 ntBASIC15.9■□□□□ 0.14
PRAMEF4O60810 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF4O60810 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms