Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.43■□□□□ 0.86
SMARCA5O60264 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCA5O60264 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SMARCA5O60264 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCA5O60264 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.42■□□□□ 0.86
SMARCA5O60264 AC021097.1-201ENST00000607902 574 ntBASIC20.42■□□□□ 0.86
SMARCA5O60264 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCA5O60264 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.42■□□□□ 0.86
SMARCA5O60264 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SMARCA5O60264 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SMARCA5O60264 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 AL391005.1-201ENST00000623953 2435 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SMARCA5O60264 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 AC109635.5-201ENST00000533593 962 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.41■□□□□ 0.86
SMARCA5O60264 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.41■□□□□ 0.86
SMARCA5O60264 MIR3909-201ENST00000579518 119 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 AL078644.1-201ENST00000609881 752 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 AC091812.2-201ENST00000619081 385 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.41■□□□□ 0.86
SMARCA5O60264 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 PCDHA1-201ENST00000378133 2726 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 AC008894.3-201ENST00000624324 3103 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.41■□□□□ 0.86
SMARCA5O60264 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCA5O60264 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCA5O60264 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCA5O60264 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SMARCA5O60264 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.4■□□□□ 0.86
SMARCA5O60264 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCA5O60264 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCA5O60264 PMS2P7-201ENST00000506558 1336 ntBASIC20.4■□□□□ 0.86
SMARCA5O60264 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCA5O60264 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.4■□□□□ 0.86
SMARCA5O60264 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCA5O60264 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCA5O60264 CYP2T1P-202ENST00000641596 2535 ntBASIC20.4■□□□□ 0.86
SMARCA5O60264 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCA5O60264 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SMARCA5O60264 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCA5O60264 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SMARCA5O60264 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms