Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PEX1O43933 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.25■□□□□ 0.19
PEX1O43933 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PEX1O43933 FLJ16779-201ENST00000612722 7638 ntBASIC16.24■□□□□ 0.19
PEX1O43933 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.24■□□□□ 0.19
PEX1O43933 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 FAM45BP-202ENST00000592932 1624 ntBASIC16.24■□□□□ 0.19
PEX1O43933 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.24■□□□□ 0.19
PEX1O43933 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.24■□□□□ 0.19
PEX1O43933 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.24■□□□□ 0.19
PEX1O43933 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 AP001005.1-201ENST00000571755 1248 ntBASIC16.24■□□□□ 0.19
PEX1O43933 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PEX1O43933 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.24■□□□□ 0.19
PEX1O43933 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PEX1O43933 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PEX1O43933 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
PEX1O43933 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PEX1O43933 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PEX1O43933 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PEX1O43933 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PEX1O43933 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.23■□□□□ 0.19
PEX1O43933 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.23■□□□□ 0.19
PEX1O43933 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PEX1O43933 AC073648.2-201ENST00000510116 352 ntBASIC16.23■□□□□ 0.19
PEX1O43933 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.23■□□□□ 0.19
PEX1O43933 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.23■□□□□ 0.19
PEX1O43933 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.23■□□□□ 0.19
PEX1O43933 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.23■□□□□ 0.19
PEX1O43933 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.23■□□□□ 0.19
PEX1O43933 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.23■□□□□ 0.19
PEX1O43933 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PEX1O43933 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.23■□□□□ 0.19
PEX1O43933 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PEX1O43933 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PEX1O43933 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.23■□□□□ 0.19
PEX1O43933 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.23■□□□□ 0.19
PEX1O43933 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PEX1O43933 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms