Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SRGAP3O43295 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.52■□□□□ 0.88
SRGAP3O43295 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP3O43295 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SRGAP3O43295 LINC01144-201ENST00000626198 1710 ntBASIC20.52■□□□□ 0.88
SRGAP3O43295 UXT-AS1-201ENST00000590504 1525 ntBASIC20.52■□□□□ 0.87
SRGAP3O43295 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SRGAP3O43295 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.52■□□□□ 0.87
SRGAP3O43295 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP3O43295 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SRGAP3O43295 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.52■□□□□ 0.87
SRGAP3O43295 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP3O43295 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
SRGAP3O43295 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 MIR346-201ENST00000362234 95 ntBASIC20.51■□□□□ 0.87
SRGAP3O43295 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP3O43295 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP3O43295 KRT8P23-201ENST00000560090 1207 ntBASIC20.51■□□□□ 0.87
SRGAP3O43295 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SRGAP3O43295 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP3O43295 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.51■□□□□ 0.87
SRGAP3O43295 AC073389.1-201ENST00000595595 795 ntBASIC20.51■□□□□ 0.87
SRGAP3O43295 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP3O43295 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.51■□□□□ 0.87
SRGAP3O43295 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.51■□□□□ 0.87
SRGAP3O43295 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP3O43295 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SRGAP3O43295 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP3O43295 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SRGAP3O43295 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.51■□□□□ 0.87
SRGAP3O43295 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRGAP3O43295 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.51■□□□□ 0.87
SRGAP3O43295 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.51■□□□□ 0.87
SRGAP3O43295 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.5■□□□□ 0.87
SRGAP3O43295 ME2P1-201ENST00000426028 1970 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 FOXO1B-201ENST00000504678 1527 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.5■□□□□ 0.87
SRGAP3O43295 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 AC093724.1-201ENST00000448659 1027 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.5■□□□□ 0.87
SRGAP3O43295 AC023141.5-201ENST00000458585 616 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.5■□□□□ 0.87
SRGAP3O43295 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 AC105233.2-201ENST00000523697 349 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 AF228730.5-201ENST00000530288 346 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.5■□□□□ 0.87
SRGAP3O43295 AC084121.4-201ENST00000641598 221 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 AF228730.8-201ENST00000642140 221 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 AC099398.1-201ENST00000567919 2776 ntBASIC20.5■□□□□ 0.87
SRGAP3O43295 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRGAP3O43295 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.5■□□□□ 0.87
SRGAP3O43295 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms